# Ruby PDB protein structure API?

**URL:** <https://www.ruby-forum.com/t/ruby-pdb-protein-structure-api/180090>\
**Category:** Ruby\
**Created:** [December 11, 2009, 8:25am UTC](https://www.ruby-forum.com/t/ruby-pdb-protein-structure-api/180090 "2009-12-11T08:25:21Z")\
**Posts on this page:** 3\
**Page:** 1

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**Author:** ![bwv549](https://www.ruby-forum.com/letter_avatar_proxy/v4/letter/b/ac8455/32.png) [@bwv549](https://www.ruby-forum.com/u/bwv549)\
**Post date:** [December 11, 2009, 8:25am UTC](https://www.ruby-forum.com/t/ruby-pdb-protein-structure-api/180090/1 "2009-12-11T08:25:21Z")

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Probably not more than 1/2 year ago I used a nice package that allowed  
reading in PDB formatted protein structures in ruby. For the life of  
me I can’t find this package on the web anymore. Where did it go?

---

<div class="post-metadata">

**Author:** ![bwv549](https://www.ruby-forum.com/letter_avatar_proxy/v4/letter/b/ac8455/32.png) [@bwv549](https://www.ruby-forum.com/u/bwv549)\
**Post date:** [December 11, 2009, 8:30am UTC](https://www.ruby-forum.com/t/ruby-pdb-protein-structure-api/180090/2 "2009-12-11T08:30:37Z")

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It’s right where it should be:

[http://bioruby.org/rdoc/classes/Bio/PDB.html](http://bioruby.org/rdoc/classes/Bio/PDB.html)

It is somewhat remarkable that this is almost un-findable from  
google. For instance, none of these searches bring up the bioruby PDB  
api on the first page of hits:

```
ruby pdb protein structure
ruby pdb
(etc...)

```

Sorry to bother.

---

<div class="post-metadata">

**Author:** ![bwv549](https://www.ruby-forum.com/letter_avatar_proxy/v4/letter/b/ac8455/32.png) [@bwv549](https://www.ruby-forum.com/u/bwv549)\
**Post date:** [December 11, 2009, 6:28pm UTC](https://www.ruby-forum.com/t/ruby-pdb-protein-structure-api/180090/3 "2009-12-11T18:28:12Z")

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> ```
> ruby pdb protein structure
> ruby pdb
> (etc...)
> 
> ```

No bother! Besides, this list is indexed by Google. Hopefully  
you’ve just provided Googlers a way to find it via those search  
terms 🙂
